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Table of Contents
Dissertation
Master Thesis
| Name | Research Title |
|---|---|
| Kaname Kojima | 2007 Master Course (Department of Computer Science, Graduate School of Information Science and Technology, The University of Tokyo) Efficient Grid Layout Algorithm for Biological Networks with Various Biological Attributes |
| Eric Perrier | 2007 Master Course (Department of Computer Science, Gradudate School of Information Science and Technology, The University of Tokyo) Finding Optimal Bayesian Network Based on Super-structure |
| Mitsuru Kato | 2005 Master Course (Departement of Computer Science, Graduate School of Information Science and Technology, The University of Tokyo) Automatic Drawing of Biological Networks Using cross Cost and Subcomponent Data |
| Kazuyuki Numata | 2005 Master Course (Departement of Computer Science, Graduate School of Information Science and Technology, The University of Tokyo) Memory-Efficient Hierarchical Clustering Algorithms for Large-Scale Microarray Gene Expression Data |
| Naoki Nariai | 2004 Master Course (Departement of Computer Science, Gradudate School of Information Science and Technology, The University of Tokyo) Using Expression Data and Protein-Protein Interactions to Estimate Gene Networks |
| Osamu Hirose | 2004 Master Course (Information Science and Technology) Inferring Gene Networks by Boolean Network Model Using Microarray Data and Binding Location Data |
| Sunyong Kim | 2003 Master Course (Information Science and Technology) Dynamic Bayesian Network and Nonparametric Regression for Nonlinear Modeling of Gene Networks |
| Kentaro Kawamoto | 2002 Master Course (Information Science and Technology) |
| Tomohiro Yasuda | 1999 Master Course (Information Science and Technology) Design and Implementation of a System for Automatic Construction of Cell Lineage from Nomarski Dic Microscope Images |
Doctoral Dissertation
| Name | Research Title |
|---|---|
| Hirose Osamu | 2008.4 Doctoral Course (Information Science and Technology) University of Tokyo Statistical Inference of Gene Networks From Time Course Gene Expression Profiles Using State Space Models |
| Atsushi Doi | 2006.3 Doctoral Course（Information Science）Yamaguchi University Modeling and Simulation of Biological Pathways with Hybrid Functional Petri Net |
| Hideo Bannai | 2005.3 Doctoral Course（Information Science and Technology） Efficient Algorithms and their Applications for Optimal Pattern Discovery from Biosequences |
| Yoshinori Tamada | 2005.12 Doctoral Course（Information Science）Kyoto University Computational Methods for Estimating Gene Networks Utilizing Biological Information |
| Masao Nagasaki | 2004.3 Doctoral Course（Science） A Platform for Biopathway Modeling/Simulation and Recreating Biopathway Databases towards Simulation. |
| Ott Sascha | 2004.3 Doctoral Course（Science） Finding Optimal Models for Gene Networks |