[Poster] Li C, Nagasaki M, Saito A, Miyano S, Time-dependent key element analysis with active state transition diagram: a high-level Petri net approach, Proceedings of the 18th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB2010), X072, John B. Hynes Convention Center in Boston, MA, USA, July 11-13, 2010.
[Poster] Li C, Nagasaki M, Saito A, Miyano S, Active State Transition Diagram Analysis from Time Course Simulation Data: an HFPNe Approach, Proceedings of the 20th International Conference on Genome Informatics (GIW2009), P087, 2009.
[SoftDemo] Nagasaki M, Ueno K, Ikeda E, Li C, Kojima K, Saito A, Miyano S, Cell Illustrator Online 4.0: A Platform for Systems Biology, Proceedings of the 20th International Conference on Genome Informatics (GIW2009), S005, 2009.
[Talk/SoftDemo] C. Li, M. Nagasaki, A. Saito and S. Miyano, Simulation-based Model Checking Approach for Cell Fate Specification - Using Cell Illustrator Online: A Computational Platform for Systems Biology -, 2009 International Workshop on Computational and Integrative Biology a satellite meeting of the International Conference of Integrative Biology (CIB'2009), Sep. 18-20, 2009. Hangzhou, China.
[Poster] 長崎正朗、沼田和幸、鄭恩娥、李晨、植野和子、池田恵美、小島要、斉藤あゆむ、宮野悟、セルイラストレータオンラインとダイナミックシグナル伝達データベースへのTranspathの再構築、BMB2008 Biochemistry and Molecular Biology,3P-1034, 2008.
[Poster] M. Nagasaki, A. Saito, C. Li, K. Numata, E. Jeong and S. Miyano, Systematic Reorganization of TRANSPATH Database to Cell System Markup Language, S04, Proceedings of the 2008 Annual Conference of Japanese Society for Bioinformatics, 2008.
[Poster] K. Hioka, Y. Miwa, C. Li, Q.W. Ge, H. Matsuno and S. Miyano, An Algorithm Determining Delay Times in a Mark Graph for Smooth Signal Flowing, Proceedings of the 19th International Conference on Genome Informatics (GIW2008), S31, 2008.
[Talk/Poster] C. Li, M. Nagasaki, K. Ueno and S. Miyano, Formal Validation of Quantitative Models of Cell Fate Specification During C. elegans Vulval Development by Simulation-based Model Checking Approach, Proceedings of the 2008 Annual Conference of Japanese Society for Bioinformatics, P060/T15, 2008 (Selected as oral presentation).
[Poster] C. Li, M. Nagasaki, K. Ueno and S. Miyano, Vulval Development Modeling Using Hybrid Functional Petri Net with extension and its Simulation-based Formal Model Validation, Proceedings of the 19th International Conference on Genome Informatics (GIW2008), S09, 2008.
[Talk/SoftDemo] M. Nagasaki, E. Jeong, K. Ueno, E. Ikeda,
C. Li, K. Kojima, A. Saito and S. Miyano, Cell Illustrator 3.5 and Cell System Ontology 3.0,
Proc. of the 2007 Annual Conference of Japanese Society for Bioinformatics (JSBi2007), Software Demonstrations 02 & Oral presentation 05, 2007.
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[Poster] C. Li, Q.W. Ge, H. Matsuno and S. Miyano, On Timed Petri Nets Based Modeling and Simulation of Signaling Pathways, Proc. of the 2007 Annual Conference of Japanese Society for Bioinformatics (JSBi2007), Poster 032, 2007.
[Poster] E. Jeong, M. Nagasaki, C. Li, K. Ueno, E. Ikeda, K. Kojima, A. Saito and S. Miyano, Cell System Markup Language 3.0 and its Platform Cell Illustrator 4.0 for Systematic Translation of Cell System, Proc. of the 7th International Workshop on Advanced Genomics New Horizon, Poster 045, 2007.
[Poster] C. Li, Q.W. Ge, M. Nakata, H. Matsuno and S. Miyano, Petri Net Based Modeling and Time-Related Simulation of Signaling Pathways Demonstrated for Apoptosis, Proc. of the Seventh Annual International Workshop on Bioinformatics and Systems Biology, Poster 030, 2007.
[Poster] C. Li, Q.W. Ge, M. Nakata, H. Matsuno and S. Miyano, Structural Representation of Signaling Pathway Based on Petri Net, Proc. of 15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), Poster C023, 2007.
[Poster] C. Li, S. Suzuki, Y. Takeuchi, Q.W. Ge, M. Nakata, H. Matsuno and S. Miyano, Petri Net Based Modeling of Signaling Pathways Including Inhibitory Function, Proceedings of the 16th International Conference on Genome Informatics, p115, 2005.
[Poster] C. Li, Q.W. Ge, M. Nakata, H. Matsuno and S. Miyano, A New Petri Net Modeling Method for Signaling Pathways with a Focus on Enzyme, Proceedings of the 15th International Conference on Genome Informatics, Poster abstract, P004, 2004.
[Talk/Poster] C. Li, Q.W. Ge, M. Nakata, H. Matsuno and S. Miyano, A New Petri Net Based Modeling Method For Signaling Pathways With a Focus on Enzymes, Student Satellite Symposium, Proceedings of the 3rd Asia-Pacific Bioinformatics Conference, 2005.