以前のリビジョンの文書です
プロジェクト
| The Cell System Markup Language (CSML) is an XML format for modeling, visualizing and simulating biopathways. CSML supports to represent several pathway types including metabolic, signaling, and genetic regulatory pathways. This project aims to facilitate the exchange of biopathway data in different formats. Effort has been made for data conversion from other XML formats. In addition, to allow extensible and flexible features of CSML, the Cell System Ontology (CSO) has been developed. |
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| Bio-calculus project aims to create a theory of computer simulation language for biological phenomena, such as molecular interaction, cell-cell interaction, nucleus movements and etc. With the theory, we are developing a simulation language, bio-calculus with C++, and applies it to analyze biological phenomena in early C.elegans embryo. |
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| Software tool for representing and simulating interactions and processes in biopathways. |
